computational.science January 2019

computational.science@lists.iccsa.org

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ESORICS 2019 - Call for Workshop Proposals [24th European Symposium on Research in Computer Security, Luxembourg, 2019]
by Joaquin Garcia-Alfaro 07 Jan '19

07 Jan '19

[apologies for cross-posting] ====================================================================== CALL for WORKSHOP PROPOSALS: ESORICS 2019 24th European Symposium on Research in Computer Security University of Luxembourg, Luxembourg, September 23-27, 2019 Website: https://esorics2019.uni.lu/workshops/ ====================================================================== Overview ------------------------------------ ESORICS is the annual European research event in Computer Security. The Symposium started in 1990 and has been held in several European countries, attracting a wide international audience from both the academic and industrial communities. Proposals are solicited for Workshops to be held in conjunction with ESORICS 2019. A Workshop should aim at providing a forum on emerging topics of high interest to the security and privacy community. In the Workshop selection, particular consideration will be paid to: * Its potential interest for the security and privacy community * Its novelty with respect to other forums, especially with respect to other ESORICS workshops. * Its likely impact on the target community, including likely high participation. A workshop can be either one day or two days in length. Important Dates ------------------------------------ * Workshop proposals due: February 8, 2019 * Notification of decision: March 15, 2019 Submitting a Workshop Proposal ------------------------------------ To submit a proposal send an email to the Workshop Chair with with the information requested in the application form: * Joaquin Garcia-Alfaro (jgalfaro(a)ieee.org) The following application form should be used. (also available in Word format at http://j.mp/ESORICS19wsh) ====================================================================== ESORICS 2019 - WORKSHOP APPLICATION FORM: - Title of the Workshop: - Duration (maximum 2 days): - Draft "Call for Papers", articulating the workshop's scope and topics: - Brief summary and justification for the workshop, including anticipated benefits to the ESORICS community: - Planned activities: - Expected number of participants: - Workshop organizers: * PC Chair(s): * General Chair(s): - Workshop deadlines: * Submission deadline: * Notification to authors: * Camera-ready versions: - Planned publication of Workshop proceedings: - Data of last three years for the workshop (if applicable): * Number of submissions: * Number of accepted papers: * Number of participants: * Publication of proceedings: * Venue (co-location): ======================================================================

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Call For Papers, Tutorial and Special Sessions - CIBB 2019
by Cibb2019 Cibb2019 07 Jan '19

07 Jan '19

Call for Papers, Tutorials and Special Sessions ------------------------------------------------------------------------------- CIBB 2019 - 16th International Conference on Computational Intelligence methods for Bioinformatics and Biostatistics Bergamo, Italy, 4-6 September 2019 www.cibb2019.it ------------------------------------------------------------------------------- The main goal of the 16th edition of the CIBB international conference is to provide a multi-disciplinary forum open to researchers interested in the application of computational intelligence, in a broad sense, to open problems in bioinformatics, biostatistics, systems biology, synthetic biology, and medical informatics. Cutting edge methodologies capable of accelerating life science discoveries will be discussed. Following its tradition and roots, this year's meeting will bring together researchers from the international scientific community interested in advancements and future perspectives in bioinformatics and biostatistics. In addition, looking at current trends and future opportunities at the edge of computer and life sciences, the application of computational intelligence to systems and synthetic biology, and the consequent impact on innovative medicine, will be of great interest for the conference. Theoretical and experimental biologists are also invited to participate and present novel challenges to foster multidisciplinary collaborations. The scientific program of CIBB 2019 will include Keynote Speakers, tutorials and special sessions. Contributed papers will be presented in plenary oral sessions, special sessions, or poster sessions. TOPICS ----------------------------- Topics of interest include, but are not restricted to: - Next generation sequencing algorithms - Multi-omics data analysis - High dimensional statistical analysis of omics data - Algorithms for alternative splicing analysis - Algorithms for molecular evolution and phylogenetic analysis - Methods for the visualization of high dimensional complex omic data - Software tools for bioinformatics - Methods for comparative genomics - Methods for functional classification of genes - Methods for unsupervised analysis, validation and visualization of structures discovered in bio-molecular data - Health-informatics and medical informatics - Methods for the integration of clinical and genetic data - Heterogeneous data integration and data fusion for diagnostics - Algorithms for pharmacogenomics - Biomedical text mining and imaging - Methods for diagnosis and prognosis within personalized medicine - Statistical methods for the analysis of clinical data - Prediction of secondary and tertiary protein structures - Mass spectrometry data analysis in proteomics - Algorithms for molecular evolution and phylogenetic analysis - Bio-molecular databases and data mining - Mathematical modeling and automated reasoning on biological and synthetic systems - Computational simulation of biological systems - Methods and advances in systems biology - Spatio-temporal analysis of synthetic and biological systems - Network systems biology - Models for cell populations and tissues - Methods for the engineering of synthetic components - Modeling and engineering of interacting synthetic and biological systems - Software tools for bioinformatics, biostatistics, systems and synthetic biology GENERAL CHAIRS ----------------------------- Paolo Cazzaniga, Department of Human and Social Sciences, University of Bergamo, Italy Ivan Merelli, Institute of Biomedical Technologies, National Research Council, Italy Daniela Besozzi, Department of Informatics, Systems and Communication, University of Milano-Bicocca, Italy TECHNICAL CHAIR ----------------------------- Angela Serra, University of Tampere, Finland LOCAL ORGANIZING COMMITTEE ----------------------------- Riccardo Dondi, Department of Letters, Philosophy, Communication, University of Bergamo, IT Stefano Beretta, Department of Informatics, Systems and Communication, University of Milano-Bicocca, IT Marco S. Nobile, Department of Informatics, Systems and Communication, University of Milano-Bicocca, IT Simone Spolaor, Department of Informatics, Systems and Communication, University of Milano-Bicocca, IT IMPORTANT DATES ----------------------------- Tutorials and Special Session proposals: 15 February 2019 Paper submission deadline: 1 May 2019 Acceptance notification: 1 June 2019 Camera ready due: 1 July 2019 Author registration due: 31 July 2019 Conference: 4-6 September 2019 SUBMISSION OF PAPERS ----------------------------- Prospective authors should submit papers prepared according to the following instructions: - Papers should be submitted in PDF format (this is the only accepted format) - Papers length should be at least 4 pages and should not exceed 6 pages - We warmly recommend the use of the provided latex template and instructions <http://dinamico2.unibg.it/cazzaniga/cibb2019/cibb2019-sample.zip>. Should this not be possible, authors should reproduce the format and style of the sample paper available in the latex template folder. - Papers should adhere, as much as appropriate, to the following structure and sections: 1. Scientific background 2. Materials and methods 3. Results 4. Conclusions 5. References The submission website is https://easychair.org/conferences/?conf=cibb2019 PUBLICATION ----------------------------- PDF versions of accepted papers will be distributed at the conference. At least one author of an accepted paper is required to register and present the paper at the conference. IMPORTANT: An accepted paper will be published in the proceedings only if the final camera-ready version is accompanied by the payment of at least one registration for one of the authors. Authors of accepted papers will be invited to submit an extended version of their work to a post-conference monograph. We plan to invite all papers for a volume in the Springer series of Lecture Notes in Bioinformatics (LNBI). Continuing the tradition of CIBB, we also plan to invite the best papers, as an alternative to the publication on LNBI, to a special issue of an international scientific journal (such as BMC Bioinformatics, as in the latest editions). TUTORIALS AND SPECIAL SESSIONS ------------------------------ CIBB 2019 will run a number of Tutorials and Special Sessions. Any topic of interest for the conference is eligible for a tutorial. Tutorials typically last from one to three hours. Special sessions focus on a specific, possibly cutting-edge, topic of interest for CIBB 2019. Special session organisers will be responsible for call dissemination, the reviewing process, and organizing oral presentations. Typically, a special session will have at least 4 accepted papers and may have an invited speaker (to be negotiated). Tutorial proposals ----------------------------- - including tutorial’s title, a one page long abstract, and short CV of presenters - due by 15 February 2019 - send proposals to cibb2019(a)easychair.org Special Session proposals ----------------------------- - including the session’s title and scope, short CV of sessions chairs, preliminary list of at least 4 (possibly more) potential authors - due by 15 February 2019 - a special session is expected to have at least 4 accepted papers - send proposals to cibb2019(a)easychair.org

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worksop ICCSA2019 --Theoretical and Computational Chemistry and its Applications (TCCMA)
by Noelia faginas Lago 07 Jan '19

07 Jan '19

Dear Colleague, this is an invitation to submit a contribution to the “Theoretical and Computational Chemistry and its Applications (TCCMA)” of the 19th International Conference on Computational Science and Applications (ICCSA 2019, http://www.iccsa.org/ <http://www.iccsa.org/>) to be held on July 1 - 4, 2019 in Saint Petersburg (Russia). All accepted papers will be included in the Springer Lecture Notes in Computer Science (LNCS, http://www.springer.com/gp/computer-science/lncs <http://www.springer.com/gp/computer-science/lncs> series and indexed by Scopus, EI Engineering Index, Thomson Reuters Conference Proceedings Citation Index (included in ISI Web of Science), and several other indexing services. The papers will contain linked references, XML versions and citable DOI numbers. Submitted papers will be subject to stringent peer review by at least three experts and carefully evaluated based on originality, significance, technical soundness, and clarity of exposition. Please note that the deadline for abstract submission will be extended to Feb 17, 2019. The themes of the Workshop include (but are not limited to): • Molecular Dynamics simulations of complex systems; strategies for optimisation of the computing resources (parallel and distributed computing) • Basis sets for the quantum treatment of molecular dynamics and intermolecular interactions in gas phase and gas-surface systems • Simulations of energy transfer processes relevant for atmospheric chemistry, astrochemistry, gaseous flows and plasmas • Stereodynamics and chirality of molecular collisions • Dynamics and kinetics simulations reusing the computed electronic structure information generated by ab initio calculations from specific databases • Design and implementation of accurate and fast algorithms for parallel and distributed platforms (such as Grids and Clouds) to maximize performances extending the available information on molecular interactions • Quantum chemical calculations for molecular structure and dynamics (DFT, TDDFT, Car–Parrinello molecular dynamics....) Organizers: Noelia Faginas-Lago — noelia.faginaslago(a)unipg.it (Università degli Studi di Perugia), Andrea Lombardi Università degli Studi di Perugia) andrea.lombardi(a)unipg.it International Program Committee: Antonio Laganà, master-up srl, Vincenzo Aquilanti, Università di Perugia, Marzio Rosi, Università di Perugia, Nadia Balucani, Università di Perugia,Fernando Pirani, Università di Perugia, Federico Palazzetti, Università di Perugia, Stefano Evangelisti, Université de Toulouse III, Massimiliano Bartolomei, CSIC-Spain, Antonio Aguilar, Universitat de Barcelona, Cecilia Coletti, Università Chieti-Pescara, Roger Anderson, University of California Santa Cruz, Ricardo Gargano, Universidade de Brasília, Demetrio A. da silva Filho, Universidade de Brasília, See the attached file for author’s instructions. ==================================================================== To the authors: You can submit abstracts and papers to your session accessing the electronic submission site: http://ess.iccsa.org/ <http://ess.iccsa.org/>. Instructions to prepare and submit papers can be found on the web site (http://www.iccsa.org/ instructions-for-authors) If you are not registered, you must register before the submission. From the personal page authors are able to submit first an abstract (phase 1), then a full paper (phase 2), selecting the session from the list of sessions in the submission forms. The paper can be updated until the submission deadline. If you have some doubts or problems do not hesitate to contact the organizers. ICCSA CONFERENCE: The 19th International Conference on Computational Science and Applications (ICCSA 2019) will be held on July 1 - 4, 2018 in Saint Petersburg, Russia. ICCSA 2019 will be the next event in a series of highly successful International Conferences on Computational Science and Its Applications (ICCSA), previously held in Melbourne, Australia (2018), Trieste, Italy (2017), Beijing. China (2016), Banff, Canada (2015), Guimaraes, Portugal (2014), Ho Chi Minh City, Vietnam (2013), Salvador de Bahia, Brazil (2012), Santander, Spain (2011), Fukuoka, Japan (2010), Suwon, Korea (2009), Perugia, Italy (2008), Kuala Lumpur, Malaysia (2007), Glasgow, UK (2006), Singapore (2005), Assisi, Italy (2004), Montreal, Canada (2003), and (as ICCS) in Amsterdam, The Netherlands (2002) and San Francisco, USA (2001). The first ICCSA conference was co-organized by C.J.K. Tan (UK) and M. Gavrilova (U of Calgary, Canada) in 2003. Computational Science is a main pillar of most of the present research, industrial and commercial activities and plays a unique role in exploiting Information and Communication Technologies as innovative technologies. The ICCSA Conference offers a real opportunity to discuss new issues, tackle complex problems and find advanced enabling solutions able to shape new trends in Computational Science. This conference is sponsored by: Monash University, Australia; The University of Perugia, Italy; Kyushu Sangyo University, Japan; The University of Basilicata, Italy; University of Minho, Portugal --------- Before printing this e-mail ask yourself if you really need a hard copy. We are all responsible for the environment. ------------------------------------------------------------------------------ Dr. Noelia Faginas Lago Dipartimento di Chimica,Biologia e Biotecnologie Università di Perugia Via Elce di Sotto, 8 06123, Perugia (Italy) tel: +390755855527 fax:+390755855606 e-mail: piovro(a)gmail.com <mailto:piovro@gmail.com> , noelia.faginaslago(a)unipg.it <mailto:noelia.faginaslago@unipg.it> Skype:noelia19750852 <skype:noelia19750852>

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[CFP] GrAPL 2019 - co-located with IPDPS 2019
by Tumeo, Antonino 02 Jan '19

02 Jan '19

[Apologies if you receive multiple copies of this CFP] GrAPL 2019: Workshop on Graphs, Architectures, Programming, and Learning http://hpc.pnl.gov/grapl Co-Located with IPDPS 2019 May 20, 2019 Hilton Rio De Janeiro Brazil ----------------------------- GrAPL is the result of the combination of two IPDPS workshops: GABB: Graph Algorithms Building Blocks GraML: Workshop on The Intersection of Graph Algorithms and Machine Learning ----------------------------- Data analytics is one of the fastest growing segments of computer science. Much of the recent focus in Data Analytics has emphasized machine learning. This is understandable given the success of deep learning over the last decade. However, many real-world analytic workloads are a mix of graph and machine learning methods. Graphs play an important role in the synthesis and analysis of relationships and organizational structures, furthering the ability of machine-learning methods to identify signature features. Given the difference in the parallel execution models of graph algorithms and machine learning methods, current tools, runtime systems, and architectures do not deliver consistently good performance across data analysis workflows. In this workshop we are interested in Graphs, how their synthesis (representation) and analysis is supported in hardware and software, and the ways graph algorithms interact with machine learning. The workshop’s scope is broad which is a natural outgrowth of the wide range of methods used in large-scale data analytics workflows. The objectives of this workshop are as follows: * Understand data analytics workflows and the mix of graph and machine learning algorithms they require * Understand the synergies between evolving device technology and graph analytics applications to drive: 1) the direction of emerging hardware and software architecture, 2) new graph analytics algorithms that better exploit the emerging hardware; and 3) application workflows that mix the large graph synthesis and analytics and machine learning. * Explore different frameworks, languages and libraries to support programming graph analytics and machine learning algorithms * Evaluate the performance and scalability of integrated platforms for large graph synthesis and analysis, and machine learning While each of these topics on their own are well addressed in other workshops, we are particularly interested in the cross-cutting synergies. For example, hardware and software architectures specialized for machine learning (and in particular deep learning) may be poorly suited for graph algorithms. Can we understand these conflicting needs and perhaps find an architecture jointly optimized for both? This workshop seeks papers on the theory, model-based analysis, simulation, and analysis of operational data for graph analytics and related machine learning applications. We are particularly interested in papers that: * Discuss hardware platforms specialized for addressing large, dynamic, multi-attributed graphs and associated machine learning; * Discuss programming models and associated frameworks such as Pregel, Galois, Boost, GraphBLAS, GraphChi, etc., for building large multi-attributed graphs; * Discuss how frameworks for building graph algorithms interact with those for building machine learning algorithms; * Discuss the problem domains and problems addressable with graph methods, machine learning methods, or both; * Provide tractability performance analysis in terms of complexity, time-to-solution, problem size, and quality of solution for systems that deal with mixed data analytics workflows. Besides regular papers, papers describing work-in-progress or incomplete but sound, innovative ideas related to the workshop theme are also encouraged. ----------------------------- Important Dates ----------------------------- Position or full paper submission: February 1, 2019 Notification: February 28, 2019 Camera-ready: March 15, 2019 Workshop: May 20, 2019 ----------------------------- Submissions ----------------------------- Submission site: https://easychair.org/conferences/?conf=grapl2019 Submitted manuscripts may not exceed ten (10) pages, single-spaced double-column pages using 10-point size font on 8.5x11 inch pages (IEEE conference style), including figures, tables, and references. The templates are available at: http://www.ieee.org/conferences_events/conferences/publishing/templates.html. ----------------------------- Organization ----------------------------- General co-Chairs Tim Mattson (Intel), timothy.g.mattson(a)intel.com Antonino Tumeo (PNNL), antonino.tumeo(a)pnnl.gov Program co-Chairs Ananth Kalyanaraman (WSU), ananth(a)wsu.edu Manoj Kumar (IBM), manoj1(a)us.ibm.com Steering Committe David A. Bader (Georgia Institute of Technology) Aydın Buluç (LBNL) John Feo (PNNL) John Gilbert (UC Santa Barbara) Mahantesh Halappanavar (PNNL) Jeremy Kepner (MIT Lincoln Laboratory) Technical Program Committee Aydin Buluç, LBNL, US Timothy A. Davis, University of Florida, US Jana Doppa, Washington State University, US John Gilbert, University of California at Santa Barbara, US Oded Green, Georgia Institute of Technology & NVIDIA, US Jeremy Kepner, MIT, US Arif Khan, PNNL, US Hao Lu, ORNL, US Kamesh Madduri, The Pennsylvania State University, US Rupesh Nasre, IIT Madras, IN John Owens, University of California, Davis, US Arnau Prat, Universitat Politècnica de Catalunya, ES Jason Riedy, Georgia Institute of Technology, US P. Sadayappan, The Ohio State University, US A. Erdem Sarıyüce, University at Buffalo, US Arun Sathanur, PNNL, US Brian Van Essen, LLNL, US Flavio Vella, Free University of Bozen, IT Yangzihao Wang, University of California, Davis, US Marinka Zitnik, Stanford University, US Jaroslaw Zola, University at Buffalo, US

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computational.science January 2019